[BioC] error message in gcrma

Mohammad Esad-Djou shahrgol at web.de
Mon Jun 5 19:42:49 CEST 2006


Thanks for your answer. 


> Are you able to connect to the Bioconductor website from a web browser
> on this system?  Is there a web proxy that is preventing R from
> accessing the internet? 

Unfortunately I  have not Internet connection under Linux. I must install relevant libraries manual.
Do you have a solution under such situation?

thanks in advance,
Mohammad

> -----Ursprüngliche Nachricht-----
> Von: Seth Falcon <sfalcon at fhcrc.org>
> Gesendet: 05.06.06 19:03:07
> An: bioconductor at stat.math.ethz.ch
> Betreff: Re: [BioC] error message in gcrma


> Hi,
> 
> Mohammad Esad-Djou <shahrgol at web.de> writes:
> > I get error message in gcrma: 
> >
> > Computing affinitiesFehler in getProbePackage(probepackagename) :
> >         The current operation could not access the Bioconductor
> >         repository. Please check your internet connection, and
> >         report further problems to bioconductor at stat.math.ethz.ch
> 
> Are you able to connect to the Bioconductor website from a web browser
> on this system?  Is there a web proxy that is preventing R from
> accessing the internet?  If there is a proxy, take a look at the man
> page for download.file.
> 
> Also, I would recommend upgrading your R and Bioconductor to the
> latest released versions.
> 
> Best,
> 
> + seth
> 
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