[BioC] adjPval and qvalue

[sabrina.shao]

Hello, all
I am confused by the adjPval from maanova and qvalue. I am not sure 
after I use the matest , which one I should use if I want to take a look 
at the FDR. Should I compute the q-values of these adjusted P-values or 
just use the original p-values to compute the corresponding q-values. Or 
I have some misunderstanding about q-values and adjusted pvalues. Thanks

Sabrina