[BioC] GEOquery and platforms splitting

Peter (BioC) bioconductor-mailinglist at maubp.freeserve.co.uk
Thu May 18 16:41:31 CEST 2006


Bosotti, Roberta [Nervianoms] wrote:
> Hi all,
> 
> I downloaded a GSE file from GEO using GEOquery. The GSM file contain
> two "platforms": GPL96 and GPL97. I need to make two separate exprset
> from the two (the GSMs are not contiguous for the two platforms, but
> are mixed). Do you have any suggestion on how I could make it?
> 
> Thanks in advance, Roberta

Interesting - what was the GSE number?  That would be very helpful to 
try and reproduce the problem.

Peter



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