[BioC] A question on GO annotations

[Oosting, J. (PATH)]

I have used this dataset for a practical. The attached script shows how
I have annotated the data using data that translates the contig to
accession numbers and batchgenefinder to retrieve EntrezGene ids and
Locuslink. I hope the comments are clear enough to help you on your way.

Jan

>I have recently downloaded the dataset accompanying the 2002 article "A
gene expression signature as a predictor 
>survival in breast cancer" by van De Vijver et al. published in the New
England Journal of Medicine.
>
>There are a total of 24,496 spots on the array out of which 10,159 are
contigs with unknown annotations, i.e. 41% of the 
>total data are not annotated.
>
>The data set is now almost 4 years old. Have these contigs been
annotated now, and if so where can I find information on 
>them.