[BioC] Affymetrix Tiling arrays

[Benilton Carvalho]

The tiling arrays do not have a CDF, they use a BPMAP instead, which  
can be used in conjunction with the makePlatformDesign package to  
create a data package, which is in turn used by the oligo package to  
read in the CEL files.

How many samples are you going to be working with? This will require  
you a good amount of memory....

b


On Apr 3, 2007, at 10:07 AM, Alessandro Ferrantini wrote:

> Hi everyone,
> I am starting to analyse some tiling arrays, but I
> cannot find the corresponding CDF file in bioconductor (for example  
> hs35bm03rv02cdf or hs35bm03rv02cdf).
> What I am exactly looking for is to know the position (or index) of  
> the
> perfect matches and the corresponding sequence. Is there any way to do
> it?
>
> Thank you in advance,
>
> Alessandro
>
>
>
>
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