[BioC] affycomp package vs web version

[Stefano Calza]

Hi everybody

I'm getting some discrepancies between results from affycomp package (version 1.10.0, R version 2.4.1 Ubuntu box).

Briefly if I use the affycomp.R code within my machine, using the installed package I get different values for low AUC, med AUC and high AUC (from 
accessSpikeIn2), compared to the exact same data uploaded to the web version of affycomp.
All the others results are the same.

Any suggestion

Stefano