[BioC] exonmap questions

[James W. MacDonald]

Hi Jianping,

There is a detailed INSTALL.TXT that comes with the MySQL download:

http://xmap.picr.man.ac.uk/download/#1

And I think you will definitely need a 64 bit comp to use it. If you 
don't have access to such a machine, you might consider using 
aroma.affymetrix which is designed to run without much RAM.

Best,

Jim



Jianping Jin wrote:
> Dear list,
> 
> I am trying to use exonmap to analyze an Affy exon array data. I am 
> wondering if there is a detailed instruction available which can help me to 
> start the process (e.g. MySQL installation and setting up connection of the 
> database with exonmap)? Another question I have is if I can install MySQL 
> onto my desktop (32-bit machine) to work with exonmap or I have to install 
> the database onto a 64-bit machine?
> 
> I appreciate any help you could provide!
> 
> Jianping
> 
> 
> ##################################
> Jianping Jin Ph.D.
> Bioinformatics scientist
> Center for Bioinformatics
> Room 3133 Bioinformatics building
> CB# 7104
> University of Chapel Hill
> Chapel Hill, NC 27599
> Phone: (919)843-6105
> FAX:   (919)843-3103
> E-Mail: jjin at email.unc.edu
> 
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-- 
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623