[BioC] classification of time series data

[Wolfgang Huber]

Dear Piet,

you haven't even said whether you want to classify the genes, the
biological samples, the time points, or ...?

If it is classification of samples, have you tried a generic
classification method (e.g. random forests, svm, Tibshirani's PAM) on
features computed from your time course (e.g. average level, slope,
similarity to a template profile).

 Best wishes
 Wolfgang
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Wolfgang Huber  EBI/EMBL  Cambridge UK  http://www.ebi.ac.uk/huber

> 
> I'm looking to classify microarray data that comes in time-series  
> measurements (3 time points per class).
> 
> To my knowledge, there is no package in Bioconductor that supports  
> classification of time-series data?
> 
> If someone should know about such a package, or can hint me in the  
> right direction of a non-BC package, that would be very much  
> appreciated !
> 
> Thanks
> 
> Piet (Belgium)
> University of Antwerp
>