[BioC] problems with library goCluster

James W. MacDonald jmacdon at med.umich.edu
Thu Jan 25 19:17:54 CET 2007


Hi Caroline,

Caroline Reiff wrote:
> Hi,
> I am currently trying to learn about the various GO tool packages in 
> bioconductor following the examples in 
> http://faculty.ucr.edu/~tgirke/Documents/R_BioCond/R_BioCondManual.html#biocon_affy.
> While I had some success with GOstats, GOHyperGAll  and goTools, I am 
> having difficulties with goCluster. When I try to load the library 
> via biocLite (see below) I get the following:
> 
> 
>  >source("http://www.bioconductor.org/biocLite.R")
>  >biocLite("goCluster")
> Running getBioC version 0.1.8 with R version 2.4.0
> Running biocinstall version 1.9.9 with R version 2.4.0
> Your version of R requires version 1.9 of Bioconductor.
> dependency ''goCluster'' is not available
>  >
> 
> can anybody tell me what is going on here?

goCluster is no longer supported by its author, and is no longer part of 
BioC. Evidently it has been superceded by AMEN:

http://www.biozentrum.unibas.ch/primig/amen/

Best,

Jim


> Many thanks Caroline
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor


-- 
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623


**********************************************************
Electronic Mail is not secure, may not be read every day, and should not be used for urgent or sensitive issues.



More information about the Bioconductor mailing list