[BioC] lumiT VST error

William Mifsud wm237 at cam.ac.uk
Thu Jul 12 16:25:21 CEST 2007


>
> Can you provide the sessionInfo()? Like the version of lumi you are  
> using. I
> guess you are using the old version of lumi. Thanks!

It's lumi 1.2.0 - I had also got the same error with several previous  
versions of lumi.

 > sessionInfo()
R version 2.5.0 (2007-04-23)
i386-pc-mingw32

locale:
LC_COLLATE=English_United Kingdom.1252;LC_CTYPE=English_United  
Kingdom.1252;LC_MONETARY=English_United Kingdom. 
1252;LC_NUMERIC=C;LC_TIME=English_United Kingdom.1252

attached base packages:
[1] "grid"      "tools"     "stats"     "graphics"  "grDevices"  
"utils"     "datasets"  "methods"   "base"

other attached packages:
lumiMouseV1         lumi         mgcv      biomaRt         
RCurl          XML    beadarray beadarraySNP  quantsmooth      lodplot
      "1.2.0"      "1.2.0"     "1.3-25"     "1.10.0"       
"0.8-0"      "1.9-0"      "1.4.0"      "1.2.0"      "1.2.0"        "1.1"
     quantreg      SparseM         affy       affyio   
geneplotter      lattice     annotate      Biobase        limma
       "4.06"       "0.72"     "1.14.1"      "1.4.0"     "1.14.0"      
"0.15-4"     "1.14.1"     "1.14.0"     "2.10.5"


Thanks,

Will
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