[BioC] crlmm error: cluster centres

Beth Wilmot wilmotb at ohsu.edu
Wed Jun 6 00:50:36 CEST 2007


I am running R-2.5; Bioconductor 2.0 and oligo 1.0.2-3.

I have created a SNPQset but am unable to get the genotypes from

> hindcrlmm = crlmm(hindDataRMA,correctionFile ="correctionHind.rda")
M correction not provided. Calculating. Will take several minutes.
Error: number of cluster centres must lie between 1 and nrow(x)

This is a test set of 2 chips.

Thanks for your help,

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