[BioC] Error in the Oligo package with pd.mapping50k.xba240

Seth Falcon sfalcon at fhcrc.org
Fri Jun 22 09:50:13 CEST 2007

Hi Aashish,

"Aashish Dattani" <aashish.dattani at gmail.com> writes:
> I am trying to get the Oligo package work. But i am encountering many
> errors while doing so.
> I have successfully installed the Oligo package and the hapmap100kxba packages.
> I am using R GUI on windows and i install packages using the GUI tools.
> But when i try to intsall the pd.mapping50k.xba240, i get an error
> saying the following:
> Error in sqliteNewConnection(drv, ...) : RS-DBI driver: (could not
> connect to dbname
> "E:/biocbld/bbs-2.0-bioc/R/library/pd.mapping50k.xba240/extdata/pd.mapping50k.xba240.sqlite"
> )
> Error : .onLoad failed in 'loadNamespace' for 'pd.mapping50k.xba240'
> Error: package/namespace load failed for 'pd.mapping50k.xba240'

We are aware of this issue with the binary pdInfo packages and are
working on a fix.  Look for updated packages soon.

+ seth

Seth Falcon | Computational Biology | Fred Hutchinson Cancer Research Center

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