[BioC] SemSim package - linux distribution

[Kasper Daniel Hansen]

When you are using biocLite, you will always access the version of  
Bioconductor which fits with your R version. As you can see from the  
output you are using R-2.4.0 with Biconductor-1.9.

Now, SemSim was not part of Bioconductor 1.9, it is a devel package  
that will be added for Bioconductor 2.0. There are two ways to  
install it: 1) Install and use R-devel and 2) download the tarball  
from www.bioconductor.org. Method 2) may not work, it depends on he  
package and its dependencies.

Kasper

On Mar 29, 2007, at 3:03 PM, Tim Smith wrote:

> Hi,
>
>   I was trying to get the SemSim package for linux OS, but couldn't  
> install it. I get the following:
>   ---------------------------------------------
>> biocLite("SemSim")
> Running getBioC version 0.1.8 with R version 2.4.0
> Running biocinstall version 1.9.9 with R version 2.4.0
> Your version of R requires version 1.9 of Bioconductor.
> dependency '‘SemSim’' is not available
>
>   --------------------------------------------
>
>   Should I be doing something different?
>
>   thanks!
>
>
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