[BioC] Annbuilder for chicken data

Seth Falcon sfalcon at fhcrc.org
Thu May 3 17:03:17 CEST 2007

"Bart Buitenhuis" <Bart.Buitenhuis at agrsci.dk> writes:

> Dear bioconductor users,
> I'm trying to use Annbuilder to make an annotation package for chicken
> data. Last week (23 april 2007) I downloaded R 2.5.0 (under windows
> XP) and have downloaded the Annbuilder package.  When running my
> script (see at the end of the mail) all files are downloaded (a
> directory "bartkip" is generated with 3 sub-directories "data" ,
> "man", "R")

If you want to build annotation data package (or any R packages) on
Windows, you will need to install some additional tools.  For details
please refer to the R Windows FAQ:


> But when I try to call this package in R using library(bartkip), it is
> not working.

You need to first need to install the package using R tools like R CMD
INSTALL, but this may not work without installing additional tools
(see the FAQ).

+ seth

Seth Falcon | Computational Biology | Fred Hutchinson Cancer Research Center

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