[BioC] Beadarray

Mark Dunning md392 at cam.ac.uk
Tue May 15 11:52:56 CEST 2007


Hi Immanuel,

Could you tell me the code you are trying to run and the error you
receive please? That way I will be able to diagnose the problem. Also,
can I see the output of sessionInfo() so I know what version of the
package you have?

If you are trying to write an ExpressionSetIllumina object directly to a
text file, then it will not work. Using something like:

write.csv(exprs(BSData.normalised),file="NormalisedData.csv")

should be fine though if you just want the expression values.

Regards,

Mark

On Mon, 2007-05-14 at 15:09 +0200, Immanuel Rode wrote:
> Hi Mark,
> 
> 
> I´m still using beadarray for the analysis of my Illumina data. When I want
> to write my normalized data to file R returns an error and I have no idea
> how to force R to save my normalized data ;-). Can you tell me how I could
> manage to save the normalized data as a txt file?
> 
> Regards 
> 
> Immanuel



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