[BioC] R memory overflow in my server

D.Enrique ESCOBAR ESPINOZA escobarebio at yahoo.com
Fri May 18 15:57:37 CEST 2007

I was doing QC of ~200 hgu-133a chip,
but it runs out of memory,

I used the lowest priority with nice, is there another trick to use
in linux (excluding ulimit that kill process)?

Here they are the spec of my server (2 processors)
vendor_id       : AuthenticAMD
cpu family      : 15
model           : 5
model name      : AMD Opteron(tm) Processor 248
stepping        : 10
cpu MHz         : 2190.480
cache size      : 1024 KB
fpu             : yes
fpu_exception   : yes
cpuid level     : 1
flags           : fpu vme de pse tsc msr pae mce cx8 apic sep mtrr
pge mca cmov pat pse36 clflush mmx fxsr sse sse2 syscall nx mmxext lm
3dnowext 3dnow
bogomips        : 4384.18
TLB size        : 1024 4K pages
clflush size    : 64
cache_alignment : 64
address sizes   : 40 bits physical, 48 bits virtual
power management: ts fid vid ttp

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