[BioC] Loop Design to Reference Design

[Naomi Altman]

Dear Amin,
I expect that you are not explaining yourself well, because what you 
are suggesting does not make sense.  The design is the way that the 
data were collected.  If a loop design was used, you cannot go back 
after the experiment and "convert" to a reference design.

What are the data and what do you want to find out from them.

--Naomi

At 05:24 PM 5/21/2007, Amin Moghaddasi wrote:
>Hi,
>
>I am new in limma and looking for how to convert the Loop Design
>Microarray experiment into Refernce Design using limma package. Any
>suggestions where should I look specifically for the above reason would
>be appreciated.
>
>Best Regards,
>Amin.
>
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Naomi S. Altman                                814-865-3791 (voice)
Associate Professor
Dept. of Statistics                              814-863-7114 (fax)
Penn State University                         814-865-1348 (Statistics)
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