[BioC] CDF for Mouse gene 1.0 ST

[Henrik Bengtsson]

Hi,

you will in (almost?) all case find links to annotation files, sample
data etc for Affymetrix arrays at the corresponding "Support
Materials" page.  For chip types where Affymetrix support CDF files
you'll find the CDF files within a large zipped "Library File".  For
exon arrays, Affymetrix do not support CDF files, but will often still
provide one separately (often in an ASCII format), as is also the case
for the Mouse Gene 1.0 ST array.

Have a look at

 http://www.affymetrix.com/support/technical/byproduct.affx?product=mogene-1_0-st-v1

and you'll see there is a CDF file.

FYI, you can convert a CDF in an ASCII format into a binary format
using convertCdf() in affxparser ***and that is highly recommended***
(for speed and memory reasons).

/Henrik

On Nov 17, 2007 5:47 AM, Marco Fabbri <fabbri.marco at gmail.com> wrote:
>  I was looking for a cdf file
>
> Marco
>
>
>  Hi
> Marco,
> Are these not what you want?
>
>    from here:
>    [1]http://www.affymetrix.com/support/technical/byproduct.affx?product=mogene
>    -1_0-st-v1
>    []  [2] MoGene-1_0-st-v1 Annotations CSV README (26 KB, 9/5/07)
>    []   [3]  MoGene-1_0-st-v1 Transcript Cluster Annotations, CSV (11 MB,
>    9/17/07)
>    Pingzhao
>
>
> --
> ---------------------------------------
> Marco Fabbri
> Istituto Clinico Humanitas
> via Manzoni, 56
> 20089 Rozzano (Mi)
> Tel. 028224 5130
> Fax 028224 5101
>
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