[BioC] affTableAnn error

[James W. MacDonald]

Seth Falcon wrote:
> Richard Friedman <friedman at cancercenter.columbia.edu> writes:
> 
>> Dear Biocondcutor users.
>>
>> 	I have an error in the use of affTableAnn.
>>
>>  > anntable<-aafTableAnn(probeids[1:22690],"mouse430a2",anncols)
>> Error in probeids[1:22690] : object is not subsettable

In addition, I don't think this has anything to do with aafTableAnn(). 
The error here has to do with whether or not you can subset your 
probeids object, and apparently you cannot. What does length(probeids) give?

Best,

Jim


>>
>> Here is my sessionInfo
>>
>>  > sessionInfo()
>> Version 2.3.1 (2006-06-01)
>> i386-pc-mingw32
> 
> Your R is quite old.  Please consider upgrading to the latest R
> release (2.5.1) and reinstalling BioC packages.
> 
> + seth
> 

-- 
James W. MacDonald, M.S.
Biostatistician
Affymetrix and cDNA Microarray Core
University of Michigan Cancer Center
1500 E. Medical Center Drive
7410 CCGC
Ann Arbor MI 48109
734-647-5623