[BioC] Knn and midding value

claudio.is at libero.it claudio.is at libero.it
Mon Sep 24 12:28:33 CEST 2007


Dear Bioc,

I want to use the Knn function, from packages(class), to classify sample from a cDNA dataset in which there are some missing values. 
When I run the script, the function complains about missing values, so I checked for some strategies to overcome the problem. 
One way could be to fit the missing values on the data itself, with pamr.knnimpute, but I don't like the idea, as I maight overfit the data itself. 
On the other side I was looking for a strategy to make knn accept missing values but I could not find. 
do you have any suggestion?

--
Claudio


------------------------------------------------------
Leggi GRATIS le tue mail con il telefonino i-mode™ di Wind
http://i-mode.wind.it/




More information about the Bioconductor mailing list