[BioC] info su illumina

[Pan Du]

Hi, Casey,

If you are using the developing version of lumi  > 1.5.15, the annotation
information will be included in the featureData of the LumiBatch object
(suppose the Beadstudio output the annotation information.)
You can easily retrieve them by:
 annotation <- pData(featureData(lumi.x))

We are rebuild all the annotation packages, includes the latest Human V3 and
Mouse V2. Hopefully it can be available in the new Bioconductor release.


Pan


On 4/15/08 5:00 AM, "bioconductor-request at stat.math.ethz.ch"
<bioconductor-request at stat.math.ethz.ch> wrote:

> Message: 21
> Date: Mon, 14 Apr 2008 14:21:18 -0700
> From: "Casey Romanoski" <casey.romanoski at ucla.edu>
> Subject: [BioC]  info su illumina
> To: <bioconductor at stat.math.ethz.ch>
> Message-ID: <2B4FDA0868B64313B2CB9FBDF2876FBE at Capetop2>
> Content-Type: text/plain
> 
> Hi Lynn, 
> 
>  
> 
> I am at UCLA and trying to use the Lumi package to normalize some microarray
> data. I have data from the most current Human Ref8 V3 Illumina chip. How
> should I go about using Lumi for this data? Is there a library for this chip
> yet?
> 
>  
> 
> Thanks!!!
> 
> Casey Romanoski
> 
>  
> 
> Human Genetics, UCLA
> 
> 
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