[BioC] Bioconductor and R 2.7

aaron.j.mackey at gsk.com aaron.j.mackey at gsk.com
Tue Apr 29 20:02:23 CEST 2008


> just don't try to carry over your installed packages from the 2.6.1
> installation to the 2.7 one - please install all packages from scratch
> using biocLite (http://www.bioconductor.org/download), which
> automatically takes care of release version synchronisation between R
> and Bioconductor.

Out of curiousity, won't "update.packages()" achieve the same thing 
(assuming you've used setRepositories() to include BioC)?  I've also just 
upgraded to 2.7.0, and today update.packages() choose to download Biobase 
1.99.10 (the version from "upcoming" BioC 2.2)

Thanks,

-Aaron



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