[BioC] gcrma problem
gbradley at mycib.ac.uk
Tue Aug 12 18:06:57 CEST 2008
I'm using a custom affy chip, I have made the cdf using makecdfenv,
installed it using R CMD INSTALL ..., and I can use the package affy
sucessfully to do rma normalisations etc, but when trying to carry out
gcrma in with the package gcrma, I get :
eset <- gcrma(Data)
Adjusting for optical effect...Done.
Computing affinities "Checking to see if your internet connection
 "Environment XXXXXaprobe was not found in the Bioconductor repository."
Error in get(probepackagename) : variable "XXXXXaprobe" was not found
How can I make/ install a custom XXXXaprobe file
anyone? Thanks in advance
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