[BioC] BiomaRt annotation for the affy6.0 snps

Anguraj Sadanandam asadanandam at lbl.gov
Fri Aug 15 17:08:17 CEST 2008


Hi Marco,

  I am not sure if Biomart has updated SNP 6.0 annotation. But you can  
get the annotations from NetAffy or download from http://biosun1.harvard.edu/complab/dchip/snp6.0_genome_info.rar 
.

Best,

Anguraj


On Aug 15, 2008, at 5:50 AM, marco zucchelli wrote:

> Dear List,
>
> I wonder if an annotation exists from biomaRt for affy6.0 SNPs.
> I got genotypes with as a flat file with affy IDs for the snps and I  
> would
> like to have the rs numbers for those
>
> Best Regards
>
>
> Marco
>
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