[BioC] filtering Illumina data
Lana Schaffer
schaffer at scripps.edu
Wed Aug 20 22:09:29 CEST 2008
Hi,
I have filtered Illumina data from 46,633 probes to 6537 probes
using the Detection Pval. I used a cutoff of .05 to call
detection across all the arrays.
Can someone tell me if this is reasonable?
What is a better way of filtering?
Lana Schaffer
Biostatistics/Informatics
The Scripps Research Institute
DNA Array Core Facility
La Jolla, CA 92037
(858) 784-2263
(858) 784-2994
schaffer at scripps.edu
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