[BioC] two color array vs. one color array

Naomi Altman naomi at stat.psu.edu
Tue Dec 16 15:58:56 CET 2008

Yes.  Performance difference relative to what?  Reference design? 
Loop design?  Affy array?


At 06:17 AM 12/16/2008, Leon Yee wrote:
>Hi all,
>    The question is not related to some specific bioconductor package,
>but it is a question about array data analysis: Could a two-color-array
>be used as two one-color-array?
>    For example, I have 2 two-color-arrays, one is sample1/sample2, the
>other is sample3/sample4. Could I treat them as 4 one-color-arrays with
>sample1,2,3,4? If yes, what is the performance difference?
>    Thanks.
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>Bioconductor at stat.math.ethz.ch
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Naomi S. Altman                                814-865-3791 (voice)
Associate Professor
Dept. of Statistics                              814-863-7114 (fax)
Penn State University                         814-865-1348 (Statistics)
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