[BioC] GOstats package - Graphical representation of enriched terms - Help needed

Srinivas Iyyer srini_iyyer_bio at yahoo.com
Fri Jan 4 16:56:35 CET 2008


Dear Group, 
I used hyperGTest using 'conditional' parameter as
'True'. 

I generated HTML report of all enriched terms. There
are many such HTML tables that are difficult to look
at and reason biologically. 

Are (IS) there any methods (more than one) to
represent enriched terms, their P-values graphically. 

Such as drawing GO tree and color enriched term nodes
OR a heatmap?

If so, could you please let me know modules that can
help me in this task. 

Thanks
Srini


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