[BioC] Raw, summarized intensity data from CEL files

Naomi Altman naomi at stat.psu.edu
Mon Jul 14 19:51:36 CEST 2008


Have a look at expresso.  It allows you control 
over all aspects of the normalization and summarization process.

--Naomi

At 12:17 PM 7/14/2008, Niels Høgslund wrote:
>Dear list,
>
>Can anybody suggest a way in which I can get background-corrected and
>summarized (gcrma style), but unnormalized and unlogged data from a
>batch of CEL files?
>
>....apologies if I´m overlooking something obvious here!
>
>Thanks in advance,
>
>Niels
>
>
>
>
>Niels Høgslund
>BiRC -Bioinformatics Research Center
>Høegh-Guldbergs Gade 10
>DK-8000 Århus C
>Denmark
>phone: +45 89423100
>mail: nj at birc.au.dk
>
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Naomi S. Altman                                814-865-3791 (voice)
Associate Professor
Dept. of Statistics                              814-863-7114 (fax)
Penn State University                         814-865-1348 (Statistics)
University Park, PA 16802-2111



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