[BioC] Vignette for ShortRead

Martin Morgan mtmorgan at fhcrc.org
Sat Jul 19 05:03:01 CEST 2008

Hi Joseph --

joseph <jdsandjd at yahoo.com> writes:

> Hi Martin
> When is the vignette for the ShortRead package will be available? Also, does

I'm hoping for a completed vignette by the time of the BioC
conference, i.e., in a little more than a week.

> anybody have an example of detailed analysis of Solexa data using the 
> ShortRead package that they can share?

Likely a full analysis will involve ShortRead, Biostrings, and perhaps
other packages / R functions. It would be great to hear about what
others have done (especially on the bioc-sig-sequencing mailing list)

Thanks for your interest!


> Thanks

Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N.
PO Box 19024 Seattle, WA 98109

Location: Arnold Building M2 B169
Phone: (206) 667-2793

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