[BioC] Installing bioconductor packages on leopard inside custom R
mxkuhn at gmail.com
Wed Mar 5 21:00:02 CET 2008
This has been discussed at length on [R-SIG-Mac] circa Feb.
and the resulting discussion.
On Wed, Mar 5, 2008 at 2:32 PM, Sean Davis <sdavis2 at mail.nih.gov> wrote:
> On Wed, Mar 5, 2008 at 2:13 PM, Shripad Sinari <ssinari at tgen.org> wrote:
> > Hello,
> > I have a 64-bit Mac and Leopard. I have compiled and installed R from source
> > with gcc 4.2 for architecture x86_64.
> > * I would appreciate suggestions on installing bioconductor packages easily,
> > i.e., preferably not from source.
> > Otherwise,
> > * Can any one suggest, as how to download the sources for all available
> > packages from a repository?
> > * Does any have a script to compile these in a batch and install?
> Take a look at the help for "available.packages". You will also want
> to read the Bioconductor installation instructions on the bioconductor
> website. You can use biocLite() to install packages and specify
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