[BioC] Maanova & createdata

Marcelo Laia marcelolaia at gmail.com
Sun Nov 9 20:50:04 CET 2008

2008/11/9 Loren Engrav <engrav at u.washington.edu>:
> Hi
> In 2006 and 2007 I did a mixed linear regression with maanova and used a
> couple of lines like
> #read in the rma-processed experimental data and design file
> raw.data =
> read.madata("rma.expr.dat",designfile="design.dat",cloneid=1,pmt=2,spot=F)
> #convert the raw data from all arrays into an madata object
> data = createData(raw.data,n.rep=1,log.trans=F)
> Am now doing it over for various reasons and find no further reference to
> the createData event in the maanova User Guide
> Is it no longer necessary since the class of the read.madat obj is now
> madata?

After read.madata you junt to fitmaanova functions. createData is no
longer needed.

Marcelo Luiz de Laia
Jaboticabal - SP - Brazil

Please avoid sending me Word or PowerPoint attachments.

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