[BioC] What does this P value column measures in LIMMA Time series analysis
dejavuwide at yahoo.com
Tue Nov 11 13:56:14 CET 2008
I carried out a time series analysis of a time course dataset using LIMMA method and I obtained a list of genes that change with time. However, I wonder if any one could explain in clearer terms what the P value column is measuring?
The result output is as follows:
ID, all Time contrasts(i.e Treatment-Controls), F, P value, adj.p value
Is the p value equals the average of all the contrast p values? In fact I am thinking of seeing each contrast(i.e. time point) with it own p value separately?
Apologies for this rather naive questions.
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