[BioC] Finding Genomic Orthologs with biomaRt

Robert Gentleman rgentlem at fhcrc.org
Thu Nov 13 20:30:07 CET 2008

Hi Gundala,
  I don't know how to use biomaRt but you can use Inparanoid directly or the
hom.Hs.inp.db from within Bioconductor as one way to solve your problem.


Gundala Viswanath wrote:
> Dear all,
> Is there a way I can download the human versus all
> vertebrates orthologs using biomaRt?
> - Gundala Viswanath
> Jakarta - Indonesia
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor

Robert Gentleman, PhD
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M2-B876
PO Box 19024
Seattle, Washington 98109-1024
rgentlem at fhcrc.org

More information about the Bioconductor mailing list