[BioC] RBGL installation issues

[Li Long]

RBGL uses C++ templates extensively, previously we encountered various
issues using different C++ compilers, even different versions of g++
compilers.

Somehow the error msg in the mail is scrambled, I cannot tell what it
complains about, but it looks like something related to C++.  Probably you
could look further into that.

Li

> Hi
>
> I posted this a few hours ago on the R-help list but have had no replies.
> I thought it might be better here. Apologies for cross posting.
>
> I'm trying to install the RBGL package in order to install GOstats.
> However I am getting
> the following error; can anybody shed some light on what I'm missing?
>
> /usr/lib/gcc/i486-linux-gnu/4.1.2/../../../../include/c++/4.1.2/cstdlib:135:
> error: ‘::system’ has not been declared
>
> Thanks.
>
> Iain
>
>> sessionInfo()
> R version 2.7.2 (2008-08-25)
> i486-pc-linux-gnu
>
> locale:
> LC_CTYPE=en_GB.UTF-8;LC_NUMERIC=C;LC_TIME=en_GB.UTF-8;LC_COLLATE=en_GB.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_GB.UTF-8;LC_PAPER=en_GB.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_GB.UTF-8;LC_IDENTIFICATION=C
>
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets 
> methods   base    
>
> loaded via a namespace (and not attached):
> [1] tcltk_2.7.2 tools_2.7.2
> 	[[alternative HTML version deleted]]
>
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