[BioC] dev.copy and rRcript

Amanda Miotto a.miotto at griffith.edu.au
Fri Oct 31 06:47:33 CET 2008


   I have a Bioconductor based script running that uses dev.copy and dev.off to
   save images to my hard drive which works well. However, when I try to run it
   with Rscript (from the terminal) instead of R, it doesn't save the images as
   it should, and a file called Rplots.pdf has been created. How do I get
   around this?
   gdPlot(yeplotlist,labelCex=1)
   filename<-paste(currentgene,"graph.jpeg",sep="")
   dev.copy(jpeg, filename, width = 1000, units = "px")
   dev.off()
   Thanks,
   Amanda Miotto
   a.miotto at griffith.edu.au
   Software Engineer
   Research Computing Services
   INFORMATION SERVICES
   Griffith University, NATHAN 4111, AUSTRALIA
   Phone: +61 7 37354419 Fax: +61 7 37356650
   Web: http://eResearch.griffith.edu.au/
   PRIVILEGED - PRIVATE AND CONFIDENTIAL:
   This email and any files transmitted with it are intended solely for
   the use of the addressee(s) and may contain information which is
   confidential or privileged. If you receive this email and you are
   not the addressee(s) [or responsible for delivery of the email to the
   addressee(s)], please disregard the contents of the email, delete the
   email and notify the author immediately.


More information about the Bioconductor mailing list