[BioC] readChp in affxparser

Gábor Csárdi csardi.gabor at gmail.com
Fri Oct 31 12:39:03 CET 2008


Hmmm, I am sorry for not including these in the original post:

R version 2.8.0 (2008-10-20)
i486-pc-linux-gnu

locale:
LC_CTYPE=en_US.UTF-8;LC_NUMERIC=C;LC_TIME=en_US.UTF-8;LC_COLLATE=en_US.UTF-8;LC_MONETARY=C;LC_MESSAGES=en_US.UTF-8;LC_PAPER=en_US.UTF-8;LC_NAME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=en_US.UTF-8;LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] affxparser_1.15.0

loaded via a namespace (and not attached):
[1] tools_2.8.0

On Fri, Oct 31, 2008 at 12:34 PM, Gábor Csárdi <Gabor.Csardi at unil.ch> wrote:
> Dear All, I'm trying to read a CHP file produced by Affymetrix
> Genotyping Console software. It seems that readChp can only read the
> summary information from the file, is that correct, or am I doing
> something wrong? Is there another package or piece of software that
> can read these files?
>
> Thanks, Gabor
> --
> Gabor Csardi <Gabor.Csardi at unil.ch>     UNIL DGM
>

-- 
Gabor Csardi <Gabor.Csardi at unil.ch>     UNIL DGM



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