[BioC] stuck with creating CDF file for Affymetrix yeast tiling array.

Karthikeyan Sivaraman octotus at gmail.com
Thu Apr 9 20:14:23 CEST 2009

i am trying to create a CDF file for the affymetrix tiling array (S.
cerevisiae) -

this is what i did:
>pkg=new("AffyTilingPDInfoPkgSeed", version="0.1", author="ddd", biocViews="AnnotationData", bpmapFile="Sc03b_MF_v04.bpmap", cifFile="Sco3b_MF_v04.cif", email="..... at .....")
>makePdInfoPackage(pkg, destDir=".")

and at this point - i get this error message:

Error in gsub(nm[i], symbolValues[[i]], res)  : invalid argument

am stuck - can anyone please help me with pointer to proceed forward?

Thanks a ton.

Warm regards,

Only as high as I reach can I grow,
Only as far as I seek can I go,
Only as deep as I look can I see,
Only as much as I dream can I be.

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