[BioC] crlmm and Illumina Infinium arrays

Christian Ruckert cruckert at uni-muenster.de
Wed Apr 29 17:32:47 CEST 2009

I am trying to get copy number estimates for Illumina 660W-Quad and 
CytoSNP-12 bead arrays with package crlmm.

I have successfully read in the *.idat files. But when continuing the 
crlmmIllumina function requires the specification of a chip description 
file. Are these files yet available somewhere? All I have are the 
manifest files (*.bpm) from GenomeStudio.



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