[BioC] Windows binary for GEOquery (R 2.10.0)

Scott Markel SMarkel at accelrys.com
Tue Dec 8 01:43:25 CET 2009


I attempted to use GEOquery in R 2.10.0 today.  I'm running Windows XP.

======================
> source("http://bioconductor.org/biocLite.R")
> biocLite("GEOquery")
Using R version 2.10.0, biocinstall version 2.5.8.
Installing Bioconductor version 2.5 packages:
[1] "GEOquery"
Please wait...

Warning message:
In getDependencies(pkgs, dependencies, available, lib) :
  package 'GEOquery' is not available
======================

Checking the GEOquery package page
(http://bioconductor.org/packages/2.5/bioc/html/GEOquery.html)
I see that the Windows binary is indeed listed as "Not available".
Checking the vignette, mailing list, and a Google search didn't
provide any 2.10.0-specific information that I saw.

Are there plans for releasing a new Windows binary for GEOquery?

Scott

> sessionInfo()
R version 2.10.0 (2009-10-26) 
i386-pc-mingw32 

locale:
[1] LC_COLLATE=English_United States.1252 
[2] LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252
[4] LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] tools_2.10.0


Scott Markel, Ph.D.
Principal Bioinformatics Architect  email:  smarkel at accelrys.com
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