[BioC] limma - interpreting factorial design

john seers (IFR) john.seers at bbsrc.ac.uk
Tue Feb 24 15:14:01 CET 2009


Hi Bjoern



>I am following the example on page 47 exactly, the only difference
being using dp as Strain and TNF as >Treatment. 

Sorry, not quite accurate. I am extracting different contrasts as I just
extract the coefficients. If I follow the example contrasts I get the
results you would expect.

Regards


John



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