[BioC] Fwd: Urgent..........Problem in using ABarray

Priyanka Jain priybioinfo at gmail.com
Fri Jul 17 13:28:58 CEST 2009


---------- Forwarded message ----------
From: Priyanka Jain <priybioinfo at gmail.com>
Date: 2009/7/17
Subject: Urgent..........Problem in using ABarray
To: bioconductor at stat.math.ethz.ch


Hello Sir,
            I am using ABarray package of R. I am getting an error:

 > eset = ABarray("RawExpressionABData.txt", "ExperimentDesign.txt", "tissue")
 [1] "Number of signal column:  3"  "Number of signal column:  6"
"Number of signal column:  9"  "Number of signal column:  12"
 [5] "Number of signal column:  15" "Number of signal column:  18"
"Number of signal column:  21" "Number of signal column:  24"
 [9] "Number of signal column:  27" "Number of signal column:  30"
[1] "Number of S/N column:  "
Number of columns for signal is not the same as S/N ratio
Processing will not be performed.

I am attaching my RawExpressionABData.txt and ExperimentDesign.txt .
Please see these files and try to solve my problem as soon as
possible.

--
Priyanka Jain
Functional Genomics Unit (Room no. 611)
Institute of Genomics and Integrative Biology (CSIR)
Mall Road, New Delhi 110007.



-- 
Priyanka Jain
Functional Genomics Unit (Room no. 611)
Institute of Genomics and Integrative Biology (CSIR)
Mall Road, New Delhi 110007.
-------------- next part --------------
sampleName	assayName	tissue
A1	HB007WT_9/29/07_12:19_PM	tissueA
A2	HB007WZ_1/15/08_2:20_PM	tissueA
A3	HB0084U_4/3/08_1:59_PM	tissueA
A4	HB008CZ_4/3/08_2:16_PM	tissueA
A5	HB00GA7_10/15/08_1:02_PM	tissueA
B1	HB00CY3_9/29/07_12:43_PM	tissueB
B2	HB007WP_1/15/08_2:38_PM	tissueB
B3	HB007WX_1/15/08_2:56_PM	tissueB
B4	HB008CQ_4/3/08_2:40_PM	tissueB
B5	HB00GAH_10/15/08_12:35_PM	tissueB


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