[BioC] CDF file for Affy GeneChip miRNA array

Groot, Philip de philip.degroot at wur.nl
Thu Jul 23 12:43:52 CEST 2009


Hello all,
 
I already did create such a file from the Affymetrix provided CDF-file. Just drop a line if you're interested.
 
Regards,
 
Dr. Philip de Groot Ph.D.
Bioinformatics Researcher

Wageningen University / TIFN
Nutrigenomics Consortium
Nutrition, Metabolism & Genomics Group
Division of Human Nutrition
PO Box 8129, 6700 EV Wageningen
Visiting Address: Erfelijkheidsleer: De Valk, Building 304
Dreijenweg 2, 6703 HA  Wageningen
Room: 0052a
T: +31-317-485786
F: +31-317-483342
E-mail:   Philip.deGroot at wur.nl <mailto:Philip.deGroot at wur.nl> 
Internet: http://www.nutrigenomicsconsortium.nl <http://www.nutrigenomicsconsortium.nl/> 
             http://humannutrition.wur.nl <http://humannutrition.wur.nl/> 
             https://madmax.bioinformatics.nl <https://madmax.bioinformatics.nl/> 
 
 
 

________________________________

From: Hooiveld, Guido
Sent: Wed 22/07/2009 09:01 PM
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] CDF file for Affy GeneChip miRNA array



Hi all,

Has anyone already created a BioC-compatible CDF file for Affymetrix'
GeneChip miRNA array? If so, are you willing to share this with me?
Since i have never done so myselves, this would save me from creating
such file and all potential pitfalls that *may* occur... :)

http://www.affymetrix.com/products_services/arrays/specific/mi_rna.affx#
1_4

Thanks,
Guido


------------------------------------------------
Guido Hooiveld, PhD
Nutrition, Metabolism & Genomics Group
Division of Human Nutrition
Wageningen University
Biotechnion, Bomenweg 2
NL-6703 HD Wageningen
the Netherlands
tel: (+)31 317 485788
fax: (+)31 317 483342
internet:   http://nutrigene.4t.com <http://nutrigene.4t.com/>  <http://nutrigene.4t.com/> 
email:      guido.hooiveld at wur.nl



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