[BioC] How do you analize very large affymetrix data?

cstrato cstrato at aon.at
Tue Jun 16 18:43:13 CEST 2009


Dear Usuario

Another option could be package xps available from BioC, see also:
http://www.bioconductor.org/docs/workflows/oligoarrays/

Best regards
Christian
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C.h.r.i.s.t.i.a.n   S.t.r.a.t.o.w.a
V.i.e.n.n.a           A.u.s.t.r.i.a
e.m.a.i.l:        cstrato at aon.at
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UsuarioR España wrote:
> Hi all, 
>
> I am trying to load and apply some summarization methods to 200 .CEL files. The only R package I found solving this is aroma.affymetrix but it takes very long time to apply any normalization. 
>
> I am using R 2.9 and aroma.affymetrix version 1.1.0.
>
> Is there any other solution to this problem, what do you ussally use?
>
> Thanks in advance.
>
>
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