[BioC] Installation of a custom cdf hs133phsentrezgcdf
Saroj K Mohapatra
saroj at vt.edu
Fri May 29 02:20:31 CEST 2009
> I have downloaded the CDF hs133phsentrezgcdf version 10, tar xvf done,
> and moved the directory to
Is that enough? I thought you need 'makecdfenv' to create a package (or
an environment) from the CDF file.
This package has two functions. One reads a Affymetrix chip description
file (CDF) and creates a hash table environment containing the
location/probe set membership mapping. The other creates a package that
automatically loads that environment.
But then I am not sure in this particular case.
> However, I get this error.
> Error in library(hs133phsentrezgcdf) :
> 'hs133phsentrezgcdf' is not a valid installed package
> Ideally, I would like to do
> biocLite("hs133phsentrezgcdf") as was possible in past versions
> but package hs133phsentrezgcdf is not available in this version, I think.
> Your help is much appreciated! Apologies for this question!
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