[BioC] exon and transcription start site locations

[Wei Shi]

Dear Paul:

    I use the annotation files from NCBI website:

human:    
ftp://ftp.ncbi.nlm.nih.gov/genomes/H_sapiens/mapview/seq_gene.md.gz
Mouse:    
ftp://ftp.ncbi.nlm.nih.gov/genomes/M_musculus/mapview/seq_gene.md.gz
Rat:        
ftp://ftp.ncbi.nlm.nih.gov/genomes/R_norvegicus/mapview/seq_gene.md.gz

Cheers,
Wei


Paul Evans wrote:
> Hi,
>
> I wanted to find out the exact locations on the genes (and the chromosome) for exons and transcription start sites in the human genome. Is there any package that will let me get at this information? Alternatively, how should I go about getting this information?
> thanks!
>
>
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