[BioC] CDF File for Arabidopsis Tilling Array1.0F

Marc Carlson mcarlson at fhcrc.org
Thu Sep 10 21:44:15 CEST 2009


Hi Jane,

You want to use the makecdfenv package.  You can read about it here:

http://www.bioconductor.org/packages/release/bioc/html/makecdfenv.html


  Marc




Jie He wrote:
> Dear all,
>
> I am very new in R. Now I am trying to analyze *the data of Arabidopsis
> Tiling Array using Bioconductor. However, I noticed
> ** that the CDF files should be included when importing the CEL files so
> that
> ** we can do the QC or RMA studies. However, I could not find the CDF for
> Arabidopsis Tilling Array 1.0F but only for 1.0R.*
> *I would think they should have two separate CDF for the two chips. How can
> I generate CDF for Arabidopsis Tilling Array 1.0F?*
> *Thank you very much!!*
> **
> **
> *Jane*
>
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>
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