[BioC] chrome coordinates are not same between Ensembl and Affy's annotation file
shirley0818 at gmail.com
Thu Sep 24 20:35:14 CEST 2009
I have been trying to draw the genome graphs for some genes in human.
I found that the coordinates of some genes are not close between
Ensembl and Affy's annotation (Affymetrix Human Exon array). For
example, gene SFRS1:
SFRS1 (ENSG00000136450): Chromosome 17: 56,078,284-56,084,707
reverse strand (Ensemble 55)
SFRS1Transcript Cluster ID: 3764103 Human Exon 1.0 ST):
Can anybody tell me what happens?
More information about the Bioconductor