[BioC] RNA degradation plot

Benilton Carvalho beniltoncarvalho at gmail.com
Mon Apr 12 14:01:18 CEST 2010


you need to pass 'lty' also to the plotAffyRNAdeg function (as you did
with legend). b

On Mon, Apr 12, 2010 at 12:49 PM, Assa Yeroslaviz <frymor at gmail.com> wrote:
> Hi,
>
> I would like to know, if there is a possibility to plot the RNA Degradation
> with different line types.
> I tried it this way:
>
> deg <- AffyRNAdeg(affybatch)
> plotAffyRNAdeg(deg ,col = 1:length(ArrayIndex_norm))
> legend(-1.5, 75,
>    as.character(sampleNames(eset)),
>    lty = 1:length(ArrayIndex_norm),
>    col = 1:length(ArrayIndex_norm), cex = 0.6)
>
> But I'm getting only solid lines in my graph, but different types of lines
> in my legend.
>
> Is it possible to present several types of lines in my plot?
>
> THX
>
> Assa
>
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>
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