[BioC] CDF for Cytogenetics_Array

Wolfgang Huber whuber at embl.de
Tue Apr 27 14:09:59 CEST 2010


OK - so in this case a useful answer was obtained without following the 
posting guide.
Thanks, Benilton !
:)

> Using the oligo package, you can import the data from the Cytogenetics
> arrays (it should be able to download/install the required annotation
> package, but you can download it directly from
> http://www.bioconductor.org/packages/release/data/annotation/html/pd.cytogenetics.array.html
> ).
> 
> I don't have any workflow specific for the cyto chip yet, but this
> should suffice for you to import data and use it in combination with
> other BioC packages that you may find relevant.
> 
> b
> 
> On Tue, Apr 27, 2010 at 12:39 PM, Wolfgang Huber <whuber at embl.de> wrote:
>> Lenka Radova scripsit 27/04/10 13:28:
>>>
>>> Hi,
>>> I have a problem with new Cytogenetics Array from Affymetrix. I have
>>> original Affy .cdf file from web, but I´m not able to create a cdf-package
>>> using make.cdf.package.
>>> Thanks for any help. Lenka
>>
>> Dear Lenka
>>
>> you will increase your chances of getting a useful answer by asking a useful
>> question. You might have a look at the posting guide
>> http://www.bioconductor.org/docs/postingGuide.html
>> in order to find out how to do so.
>>
>> One particularly important point is:
>> "If possible, send a simple and reproducible example along with the output
>> of sessionInfo(). If the example produces an error, also provide the error
>> message and the output of traceback()."
>>
>> Wolfgang Huber
>> EMBL
>> http://www.embl.de/research/units/genome_biology/huber
>>
>> _______________________________________________
>> Bioconductor mailing list
>> Bioconductor at stat.math.ethz.ch
>> https://stat.ethz.ch/mailman/listinfo/bioconductor
>> Search the archives:
>> http://news.gmane.org/gmane.science.biology.informatics.conductor
>>



More information about the Bioconductor mailing list