[BioC] best match for illumina human WG-1 vs human WG-2?

Wei Shi shi at wehi.EDU.AU
Tue Aug 3 01:12:07 CEST 2010


Dear Vincent:

    About 82% of the human v1 probes (probe sequences) were replaced or 
removed in v2. Therefore, you will find very little overlap in probe 
sequence between the two versions. Maybe a sensible way to find the 
correspondence is to match the gene symbols (better to Entrez gene id) 
or RefSeq gene names.

Cheers,
Wei

Vincent Carey wrote:
> Has anyone worked out a "best match" correspondence for beads on human WG-1
> and WG-2 illumina chips?
>
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